Alleles,Epitopes No.,Target Protein,Region,Length,HTL Epitope,Scores,Percentile rank,IFN Status +/-,IFN Score 
HLA-DRB3*02:02,1,RNA-dependent RNA-polymerase (RdRp),1936-1950,15-mer,IESKWLTNKASTIID,0.9511,0.01,NEGATIVE,-0.6177
HLA-DRB3*02:02,2,RNA-dependent RNA-polymerase (RdRp),1937-1951,15-mer,ESKWLTNKASTIIDW,0.9379,0.03,NEGATIVE,-0.5811
HLA-DRB5*01:01,3,RNA-dependent RNA-polymerase (RdRp),561-575,15-mer,GRMFAMQPGKQRQIQ,0.8891,0.04,NEGATIVE,-0.2968
HLA-DRB5*01:01,4,RNA-dependent RNA-polymerase (RdRp),560-574,15-mer,VGRMFAMQPGKQRQI,0.8604,0.06,NEGATIVE,-0.1495
HLA-DRB5*01:01,5,RNA-dependent RNA-polymerase (RdRp),545-559,15-mer,KEHIVSLTGKERELS,0.844,0.08,NEGATIVE,-0.3207
HLA-DRB4*01:01,6,RNA-dependent RNA-polymerase (RdRp),1078-1092,15-mer,RTSAINGEDIDRAVS,0.9078,0.08,NEGATIVE,-0.0201
HLA-DRB4*01:01,7,RNA-dependent RNA-polymerase (RdRp),1079-1093,15-mer,TSAINGEDIDRAVSM,0.9096,0.08,NEGATIVE,-0.5037
HLA-DRB1*15:01,8,RNA-dependent RNA-polymerase (RdRp),922-936,15-mer,GDPVVFYRSFYRRTP,0.917,0.08,NEGATIVE,-0.2372
HLA-DRB1*15:01,9,RNA-dependent RNA-polymerase (RdRp),1687-1701,15-mer,LNPKVLYFIGEGAGN,0.9213,0.08,NEGATIVE,-0.1357
HLA-DRB5*01:01,10,RNA-dependent RNA-polymerase (RdRp),962-976,15-mer,VSFFKALLSIEKNER,0.8301,0.09,NEGATIVE,-0.0945
HLA-DRB5*01:01,11,RNA-dependent RNA-polymerase (RdRp),559-573,15-mer,SVGRMFAMQPGKQRQ,0.8312,0.09,NEGATIVE,-0.3647
HLA-DRB3*01:01,12,RNA-dependent RNA-polymerase (RdRp),1014-1028,15-mer,PNQLFSDSAIHYSRN,0.9115,0.1,NEGATIVE,-0.383
HLA-DRB1*03:01,13,RNA-dependent RNA-polymerase (RdRp),1361-1375,15-mer,VDKITSDQHIFSPDK,0.9523,0.1,NEGATIVE,-0.2818
HLA-DRB4*01:01,14,RNA-dependent RNA-polymerase (RdRp),1386-1400,15-mer,MPTIKGQKTDQFLNK,0.8441,0.11,NEGATIVE,-0.5876
HLA-DRB4*01:01,15,RNA-dependent RNA-polymerase (RdRp),1077-1091,15-mer,QRTSAINGEDIDRAV,0.8464,0.11,POSITIVE,0.1111
HLA-DRB3*01:01,16,RNA-dependent RNA-polymerase (RdRp),1013-1027,15-mer,SPNQLFSDSAIHYSR,0.8899,0.11,NEGATIVE,-0.2443
HLA-DRB5*01:01,17,RNA-dependent RNA-polymerase (RdRp),543-557,15-mer,NDKEHIVSLTGKERE,0.8112,0.12,NEGATIVE,-0.3005
HLA-DRB3*02:02,18,RNA-dependent RNA-polymerase (RdRp),1935-1949,15-mer,IIESKWLTNKASTII,0.8612,0.12,NEGATIVE,-0.2873
HLA-DRB1*03:01,19,RNA-dependent RNA-polymerase (RdRp),760-774,15-mer,GLDEVKADYRLAVKM,0.9462,0.12,NEGATIVE,-0.0335
HLA-DRB3*01:01,20,RNA-dependent RNA-polymerase (RdRp),37-51,15-mer,RPYLKNDNTAKVAIE,0.842,0.14,NEGATIVE,-0.2034
HLA-DRB3*01:01,21,RNA-dependent RNA-polymerase (RdRp),538-552,15-mer,RQEYLNDKEHIVSLT,0.8444,0.14,NEGATIVE,-0.2531
HLA-DRB1*15:01,22,RNA-dependent RNA-polymerase (RdRp),1194-1208,15-mer,EKKLVPVYNRQILSK,0.8951,0.14,POSITIVE,0.0267
HLA-DRB1*15:01,23,RNA-dependent RNA-polymerase (RdRp),1688-1702,15-mer,NPKVLYFIGEGAGNW,0.897,0.14,NEGATIVE,-0.1863
HLA-DRB3*01:01,24,RNA-dependent RNA-polymerase (RdRp),537-551,15-mer,VRQEYLNDKEHIVSL,0.8323,0.15,NEGATIVE,-0.369
HLA-DRB4*01:01,25,RNA-dependent RNA-polymerase (RdRp),1080-1094,15-mer,SAINGEDIDRAVSMM,0.7927,0.16,NEGATIVE,-0.2705
HLA-DRB3*01:01,26,RNA-dependent RNA-polymerase (RdRp),1012-1026,15-mer,LSPNQLFSDSAIHYS,0.8141,0.16,NEGATIVE,-0.7499
HLA-DRB3*01:01,27,RNA-dependent RNA-polymerase (RdRp),536-550,15-mer,VVRQEYLNDKEHIVS,0.8241,0.16,NEGATIVE,-0.198
HLA-DRB1*03:01,28,RNA-dependent RNA-polymerase (RdRp),827-841,15-mer,WINTILDDIKTSAES,0.9368,0.16,NEGATIVE,-0.3412
HLA-DRB1*03:01,29,RNA-dependent RNA-polymerase (RdRp),828-842,15-mer,INTILDDIKTSAESI,0.9368,0.16,NEGATIVE,-0.4619
HLA-DRB3*01:01,30,RNA-dependent RNA-polymerase (RdRp),1440-1454,15-mer,WGDGFISDHAFMDFK,0.7947,0.17,POSITIVE,0.0713
HLA-DRB3*01:01,31,RNA-dependent RNA-polymerase (RdRp),36-50,15-mer,KRPYLKNDNTAKVAI,0.8013,0.17,NEGATIVE,-0.0081
HLA-DRB3*01:01,32,RNA-dependent RNA-polymerase (RdRp),1441-1455,15-mer,GDGFISDHAFMDFKI,0.7763,0.18,POSITIVE,0.044
HLA-DRB3*02:02,33,RNA-dependent RNA-polymerase (RdRp),1282-1296,15-mer,RTTNYHFDTSPINQA,0.8028,0.18,NEGATIVE,-0.3431
HLA-DRB1*15:01,34,RNA-dependent RNA-polymerase (RdRp),591-605,15-mer,PETLTKYGDLDLQRI,0.8865,0.18,NEGATIVE,-0.6085
HLA-DRB4*01:01,35,RNA-dependent RNA-polymerase (RdRp),465-479,15-mer,KTNLEMVLNDKAISP,0.7659,0.19,NEGATIVE,-1.0173
HLA-DRB4*01:01,36,RNA-dependent RNA-polymerase (RdRp),1746-1760,15-mer,GEGLSMETTDATQKT,0.7763,0.19,NEGATIVE,-0.2979
HLA-DRB4*01:01,37,RNA-dependent RNA-polymerase (RdRp),1385-1399,15-mer,LMPTIKGQKTDQFLN,0.7772,0.19,NEGATIVE,-0.622
HLA-DRB1*15:01,38,RNA-dependent RNA-polymerase (RdRp),590-604,15-mer,FPETLTKYGDLDLQR,0.8831,0.19,NEGATIVE,-0.5655
HLA-DRB1*07:01,39,RNA-dependent RNA-polymerase (RdRp),18-32,15-mer,LKGVISFSETNAIGS,0.889,0.19,POSITIVE,0.0427
HLA-DRB3*02:02,40,RNA-dependent RNA-polymerase (RdRp),1283-1297,15-mer,TTNYHFDTSPINQAL,0.7968,0.2,NEGATIVE,-0.4797
HLA-DRB1*03:01,41,RNA-dependent RNA-polymerase (RdRp),1360-1374,15-mer,LVDKITSDQHIFSPD,0.9307,0.2,NEGATIVE,-0.5392
HLA-DRB1*03:01,42,RNA-dependent RNA-polymerase (RdRp),761-775,15-mer,LDEVKADYRLAVKML,0.9326,0.2,NEGATIVE,-0.1174
HLA-DRB5*01:01,1,Protein M2-1,53-67,15-mer,ADGLSIISGAGREDR,0.8064,0.12,POSITIVE,0.039
HLA-DRB4*01:01,2,Protein M2-1,155-169,15-mer,LKKLAKLIIDLSAGA,0.7883,0.18,POSITIVE,0.0849
HLA-DRB1*07:01,3,Protein M2-1,31-45,15-mer,PDRYLLIRSNYLLNQ,0.8923,0.19,POSITIVE,0.3165
HLA-DRB5*01:01,4,Protein M2-1,52-66,15-mer,RADGLSIISGAGRED,0.7272,0.23,POSITIVE,0.1582
HLA-DRB4*01:01,5,Protein M2-1,154-168,15-mer,KLKKLAKLIIDLSAG,0.7473,0.23,POSITIVE,0.101
HLA-DRB4*01:01,6,Protein M2-1,156-170,15-mer,KKLAKLIIDLSAGAD,0.6831,0.3,POSITIVE,0.1948
HLA-DRB1*07:01,7,Protein M2-1,30-44,15-mer,WPDRYLLIRSNYLLN,0.8546,0.3,POSITIVE,0.6174
HLA-DRB5*01:01,8,Protein M2-1,54-68,15-mer,DGLSIISGAGREDRT,0.6456,0.46,POSITIVE,0.2333
HLA-DRB3*02:02,9,Protein M2-1,38-52,15-mer,RSNYLLNQLLRNTDR,0.6698,0.46,NEGATIVE,-0.3169
HLA-DRB4*01:01,10,Protein M2-1,153-167,15-mer,EKLKKLAKLIIDLSA,0.579,0.47,POSITIVE,0.345
HLA-DRB3*01:01,11,Protein M2-1,79-93,15-mer,VQGYIDDNQSITKAA,0.6708,0.49,NEGATIVE,-0.1358
HLA-DRB5*01:01,1,Major Surface Protein,174-188,15-mer,ATTFRMSSTGKRPTT,0.88,0.05,POSITIVE,0.0979
HLA-DRB5*01:01,2,Major Surface Protein,173-187,15-mer,RATTFRMSSTGKRPT,0.8542,0.07,POSITIVE,0.3206
HLA-DRB5*01:01,3,Major Surface Protein,172-186,15-mer,RRATTFRMSSTGKRP,0.7515,0.22,NEGATIVE,-0.0335
HLA-DRB5*01:01,4,Major Surface Protein,175-189,15-mer,TTFRMSSTGKRPTTT,0.7216,0.25,POSITIVE,0.2767
HLA-DRB5*01:01,5,Major Surface Protein,22-36,15-mer,IRAIDMLKARVKNRV,0.6823,0.35,POSITIVE,0.071
HLA-DRB5*01:01,6,Major Surface Protein,21-35,15-mer,NIRAIDMLKARVKNR,0.6787,0.37,NEGATIVE,-0.2645
HLA-DRB1*07:01,1,Protein M2-2,41-55,15-mer,ALSDGIVKSHTNIYN,0.5573,2,NEGATIVE,-0.4065
HLA-DRB4*01:01,2,Protein M2-3,20-34,15-mer,GPVFITIEVDEMIWT,0.2271,3.2,POSITIVE,0.3671
HLA-DRB1*07:01,3,Protein M2-4,43-57,15-mer,SDGIVKSHTNIYNCY,0.4293,3.4,NEGATIVE,-0.1395
HLA-DRB1*07:01,4,Protein M2-5,42-56,15-mer,LSDGIVKSHTNIYNC,0.4328,3.4,NEGATIVE,-0.3917
HLA-DRB1*03:01,5,Protein M2-6,41-55,15-mer,ALSDGIVKSHTNIYN,0.4079,3.5,NEGATIVE,-0.4065
HLA-DRB3*01:01,6,Protein M2-7,41-55,15-mer,ALSDGIVKSHTNIYN,0.1436,3.9,NEGATIVE,-0.4065
HLA-DRB1*03:01,7,Protein M2-8,43-57,15-mer,SDGIVKSHTNIYNCY,0.3612,4,NEGATIVE,-0.1395
HLA-DRB1*15:01,1,Fusion Glycoprotein,162-176,15-mer,VRELKDFVSKNLTRA,0.8909,0.16,NEGATIVE,-0.2181
HLA-DRB4*01:01,2,Fusion Glycoprotein,63-77,15-mer,GPSLIKTELDLTKSA,0.7834,0.18,NEGATIVE,-0.2963
HLA-DRB5*01:01,3,Fusion Glycoprotein,131-145,15-mer,ESEVTAIKNALKTTN,0.7724,0.2,NEGATIVE,-0.6381
HLA-DRB1*03:01,4,Fusion Glycoprotein,415-429,15-mer,ADTVTIDNTVYQLSK,0.9175,0.26,NEGATIVE,-0.3028
HLA-DRB4*01:01,5,Fusion Glycoprotein,62-76,15-mer,DGPSLIKTELDLTKS,0.7079,0.28,NEGATIVE,-0.6801
HLA-DRB5*01:01,6,Fusion Glycoprotein,130-144,15-mer,LESEVTAIKNALKTT,0.7116,0.28,NEGATIVE,-0.4541
HLA-DRB1*07:01,7,Fusion Glycoprotein,119-133,15-mer,TAGVAIAKTIRLESE,0.8613,0.28,NEGATIVE,-0.0964
HLA-DRB4*01:01,8,Fusion Glycoprotein,200-214,15-mer,FLNVVRQFSDNAGIT,0.6957,0.3,NEGATIVE,-0.0633
HLA-DRB5*01:01,9,Fusion Glycoprotein,152-166,15-mer,GNGVRVLATAVRELK,0.6934,0.33,POSITIVE,0.2823
HLA-DRB1*15:01,10,Fusion Glycoprotein,161-175,15-mer,AVRELKDFVSKNLTR,0.8499,0.33,NEGATIVE,-0.3827
HLA-DRB1*03:01,11,Fusion Glycoprotein,218-232,15-mer,SLDLMTDAELARAVS,0.8976,0.34,NEGATIVE,-0.0671
HLA-DRB4*01:01,12,Fusion Glycoprotein,199-213,15-mer,RFLNVVRQFSDNAGI,0.6421,0.39,NEGATIVE,-0.2017
HLA-DRB1*07:01,13,Fusion Glycoprotein,118-132,15-mer,VTAGVAIAKTIRLES,0.8256,0.41,POSITIVE,0.0017
HLA-DRB1*03:01,14,Fusion Glycoprotein,217-231,15-mer,ISLDLMTDAELARAV,0.863,0.5,NEGATIVE,-0.0333
HLA-DRB1*15:01,1,Small Hydrophobic Protein,95-109,15-mer,KRLIQRYTDSVINKD,0.9525,0.03,POSITIVE,0.2601
HLA-DRB1*15:01,2,Small Hydrophobic Protein,94-108,15-mer,FKRLIQRYTDSVINK,0.9214,0.08,POSITIVE,0.312
HLA-DRB3*01:01,3,Small Hydrophobic Protein,19-33,15-mer,LKKIIKDHSGKVLIA,0.7812,0.18,POSITIVE,0.0838
HLA-DRB3*01:01,4,Small Hydrophobic Protein,18-32,15-mer,HLKKIIKDHSGKVLI,0.7557,0.22,NEGATIVE,-0.1494
HLA-DRB1*15:01,5,Small Hydrophobic Protein,96-110,15-mer,RLIQRYTDSVINKDT,0.8471,0.33,POSITIVE,0.127
HLA-DRB3*01:01,6,Small Hydrophobic Protein,17-31,15-mer,THLKKIIKDHSGKVL,0.7105,0.34,NEGATIVE,-0.3663
HLA-DRB4*01:01,7,Small Hydrophobic Protein,15-Jan,15-mer,MITLDVIKSDGSSKT,0.6319,0.41,NEGATIVE,-0.1182
HLA-DRB3*02:02,1,Matrix Protein,36-50,15-mer,FPLFQANTPPAVLLD,0.9475,0.01,NEGATIVE,-0.1758
HLA-DRB3*02:02,2,Matrix Protein,84-98,15-mer,LPKKFEVNATVALDE,0.9749,0.01,NEGATIVE,-0.5496
HLA-DRB3*02:02,3,Matrix Protein,85-99,15-mer,PKKFEVNATVALDEY,0.9768,0.01,NEGATIVE,-0.3635
HLA-DRB3*02:02,4,Matrix Protein,83-97,15-mer,VLPKKFEVNATVALD,0.943,0.02,NEGATIVE,-0.2522
HLA-DRB1*15:01,5,Matrix Protein,191-205,15-mer,QAKIAPYAGLIMIMT,0.9302,0.06,POSITIVE,0.2374
HLA-DRB3*02:02,6,Matrix Protein,37-51,15-mer,PLFQANTPPAVLLDQ,0.9019,0.07,NEGATIVE,-0.1801
HLA-DRB3*02:02,7,Matrix Protein,35-49,15-mer,WFPLFQANTPPAVLL,0.9076,0.07,NEGATIVE,-0.2147
HLA-DRB3*02:02,8,Matrix Protein,86-100,15-mer,KKFEVNATVALDEYS,0.9104,0.07,NEGATIVE,-0.405
HLA-DRB1*07:01,9,Matrix Protein,58-72,15-mer,TTLYAASQSGPILKV,0.9339,0.08,NEGATIVE,-0.1404
HLA-DRB1*07:01,10,Matrix Protein,57-71,15-mer,ITTLYAASQSGPILK,0.9352,0.08,POSITIVE,0.077
HLA-DRB3*02:02,11,Matrix Protein,34-48,15-mer,IWFPLFQANTPPAVL,0.8851,0.1,POSITIVE,0.0995
HLA-DRB3*02:02,12,Matrix Protein,67-81,15-mer,GPILKVNASAQGAAM,0.863,0.11,NEGATIVE,-0.4476
HLA-DRB3*02:02,1,Phosphoprotein,22-36,15-mer,DILFMGNEAAKLAEA,0.9085,0.07,POSITIVE,0.4455
HLA-DRB3*02:02,2,Phosphoprotein,21-35,15-mer,KDILFMGNEAAKLAE,0.8672,0.11,POSITIVE,0.2754
HLA-DRB3*02:02,3,Phosphoprotein,124-138,15-mer,KKVSFTPNEPGKYTK,0.7004,0.34,NEGATIVE,-0.1429
HLA-DRB3*02:02,4,Phosphoprotein,20-24,15-mer,GKDILFMGNEAAKLA,0.6975,0.35,POSITIVE,0.2106
HLA-DRB3*02:02,5,Phosphoprotein,23-37,15-mer,ILFMGNEAAKLAEAF,0.6772,0.41,POSITIVE,0.3792
HLA-DRB3*02:02,6,Phosphoprotein,125-139,15-mer,KVSFTPNEPGKYTKL,0.6705,0.46,NEGATIVE,-0.3024
HLA-DRB5*01:01,1,Nucleoprotein,345-359,15-mer,TELFSAAESYAKSLK,0.8544,0.07,NEGATIVE,-0.2143
HLA-DRB1*07:01,2,Nucleoprotein,88-102,15-mer,SEVQVVLTRTYSLGK,0.8797,0.21,POSITIVE,0.2924
HLA-DRB5*01:01,3,Nucleoprotein,344-358,15-mer,NTELFSAAESYAKSL,0.7478,0.22,NEGATIVE,-0.1134
HLA-DRB1*07:01,4,Nucleoprotein,89-103,15-mer,EVQVVLTRTYSLGKV,0.8737,0.23,POSITIVE,0.3001
HLA-DRB1*07:01,5,Nucleoprotein,55-69,15-mer,KHADYKYAAEIGIQY,0.8503,0.32,NEGATIVE,-0.1668
HLA-DRB5*01:01,6,Nucleoprotein,343-357,15-mer,PNTELFSAAESYAKS,0.6943,0.33,POSITIVE,0.3539
HLA-DRB4*01:01,7,Nucleoprotein,62-76,15-mer,AAEIGIQYISTALGS,0.6483,0.36,POSITIVE,0.1166
HLA-DRB1*07:01,8,Nucleoprotein,56-70,15-mer,HADYKYAAEIGIQYI,0.8293,0.36,NEGATIVE,-0.0308
HLA-DRB3*02:02,9,Nucleoprotein,79-93,15-mer,VQQILRNSGSEVQVV,0.6901,0.38,NEGATIVE,-0.3418
HLA-DRB3*02:02,10,Nucleoprotein,78-92,15-mer,RVQQILRNSGSEVQV,0.6718,0.43,NEGATIVE,-0.3127
HLA-DRB1*07:01,11,Nucleoprotein,54-68,15-mer,AKHADYKYAAEIGIQ,0.8118,0.44,NEGATIVE,-0.0667
HLA-DRB5*01:01,12,Nucleoprotein,346-360,15-mer,ELFSAAESYAKSLKE,0.6378,0.47,NEGATIVE,-0.6694
